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MS Scan

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Automated Extraction of Ion Chromatograms from Mass Chromatograms​

The Mnova Gears MS Scan plugin processes total ion current (TIC) data and extracts mass spectra in the time ranges of your choice, then for each of them reads the peaks and extracts the chromatograms of the masses that pass the specified threshold.

You can input your TIC documents in batches, set your analysis and output preferences, then run MS Scan. Your results will be ready in few minutes!

Software Solution for Chemical Reaction Optimization

MS Scan

Benefits

Automated Mass Spectra Extraction: Process total ion current (TIC) data to extract Mass Spectra within chosen time ranges and chromatograms based on specified thresholds.

Batch Processing: Input TIC documents in batches, set analysis preferences, and get results within minutes.

Flexible Results Display: View and edit MS Scan results with the Mgears Viewer, selecting datasets, RT ranges, and m/z values for detailed inspection

Customizable Reports: Generate CSV and HTML reports, choosing variables like RT, m/z, areas, and heights of peaks.

MS Scan

Features

Flexible and easy display of results with Mgears viewer

MS Scan simplifies the setup of spectrum and chromatogram extraction ranges:

  • Extract up to three mass spectra by defining distinct retention time intervals.
  • Specify the minimum relative abundance percentage to capture pertinent data.
  • Customize tolerance and minimum area thresholds for peaks, ensuring precise analysis.

These capabilities streamline spectral data extraction, optimizing and personalizing your analysis workflow.

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Mnova-Gears-MS Scan

Customizable reporting features

MS Scan automatically generates both CSV and HTML reports, providing flexibility to customize the variables displayed. You can include Retention Time (RT), m/z values, peak areas, heights of selected peaks, and other relevant variables in your reports. ​

This capability ensures that you can tailor your reports precisely to meet your analysis requirements, showcasing the most pertinent data effectively.

Mnova-Gears-MS Scan
Help & Resources

Starting Guides & Manuals

MS Scan Guide Mnova Gears - Manual
Academic, Government & Industrial

Target Audience

Analytical Chemists
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